- Roth, T., Mazzadi, S., Pulsipher, J. L., and Ricardez-Sandoval, L.</b> (2025). “Enhancing Sustainable Agriculture Through Optimized Polyculture Hydroponic Operating Strategies”. Under Review.
- González, L. D., Pulsipher, J. L., Jiang, S., Soderstrom, T., and Zavala, V. M.</b> (2025). “A Digital Twin Simulator of a Pastillation Process with Applications to Automatic Control based on Computer Vision”. Under Review. paper
- Gondosiswanto, E. and Pulsipher, J. L. (2025). “Advances to Modelling and Solving Infinite-Dimensional Optimization Problems in InfiniteOpt.jl”. Digital Chemcial Engineering. paper
- Ovalle, D., Pulsipher, J. L., Ye, Y., Harshbarger, K., Bury, S., Laird, C. D., and Grossmann, I. E. (2025). “Optimal reactive operation of general topology supply chain and manufacturing networks under disruptions”. AICHE Journal. paper
- Elorza Casa, C. A., Ricardez-Sandoval, L., and Pulsipher, J. L. (2025). “A Comparison of Strategies to Embed Physics-Informed Neural Networks in Nonlinear Model Predictive Control Formulations Solved via Direct Transcription”. Computers & Chemical Engineering. paper
- Ovalle, D., Mazzadi, S., Laird, C. D., Grossmann, I. E., and Pulsipher, J. L. (2025). “Event Constrained Programming”. Computers & Chemical Engineering. paper
- Ammari, B. L., Johnson, E. S., Stinchfield, G., Kim, Taehun, Bynum, M., Hart, W. E., Pulsipher, J. L., and Laird, C. D. (2023). “Linear Model Decision Trees as Surrogates in Optimization of Engineering Applications”. Computers & Chemical Engineering. paper
- Pulsipher, J. L., Coutinho, L. D., Soderstrom, T. A., and Zavala, V. M. (Aug. 2022). “SAFE-OCC: A Novelty Detection Framework for Convolutional Neural Network Sensors and its Application in Process Control”. In: Journal of Process Control 117, pp. 78–97. paper
- Pulsipher, J. L., Davidson, B. R., and Zavala, V. M. (Aug. 2022). “Random Field Optimization”. In: Computers & Chemical Engineering 165. paper
- Pulsipher, J. L., Zhang, W., Hongisto, T. J., and Zavala, V. M. (Jan. 2022). “A unifying modeling abstraction for infinite-dimensional optimization”. In: Computers & Chemical Engineering 156. paper
- Pulsipher, J. L. and Zavala, V. M. (Feb. 2020). “Measuring and optimizing system reliability: a stochastic programming approach”. In: Top 28.3, pp. 626–645. paper
- Pulsipher, J. L. and Zavala, V. M. (Sept. 2019). “A scalable stochastic programming approach for the design of flexible systems”. In: Computers & Chemical Engineering 128, pp. 69–76. paper
- Pulsipher, J. L., Rios, D., and Zavala, V. M. (July 2019). “A computational framework for quantifying and analyzing system flexibility”. In: Computers & Chemical Engineering 126, pp. 342–355. paper
- Pulsipher, J. L. and Zavala, V. M. (Nov. 2018). “A mixed-integer conic programming formulation for computing the flexibility index under multivariate gaussian uncertainty”. In: Computers & Chemical Engineering 119, pp. 302–308. paper
- Martin, R. A., Blackburn, L., Pulsipher, J. L., Franke, K., and Hedengren, J. D. (May 2017). “Potential benefits of combining anomaly detection with view planning for UAV infrastructure modeling”. In: Remote Sensing 9.5, p. 434. paper